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SharedObject - Sharing R objects across multiple R processes without memory duplication

This package is developed for facilitating parallel computing in R. It is capable to create an R object in the shared memory space and share the data across multiple R processes. It avoids the overhead of memory dulplication and data transfer, which make sharing big data object across many clusters possible.

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infrastructuresharedobjectcpp

7.13 score 51 stars 1 dependents 11 scripts

Epoch - IEEG (Intracranial Electroencephalography) Epoch Data Tools

Provides tools for working with iEEG matrix data, including downloading curated iEEG data from OSF (The Open Science Framework <https://osf.io/>) (EpochDownloader()), making new objects (Epoch()), processing (crop() and resample()), and visualizing the data (plot()).

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5.81 score 2 stars 1 dependents 18 scripts 161 downloads

EZFragility - Compute Neural Fragility for Ictal iEEG Time Series

Provides tools to compute the neural fragility matrix from intracranial electrocorticographic (iEEG) recordings, enabling the analysis of brain dynamics during seizures. The package implements the method described by Li et al. (2017) <doi:10.23919/ACC.2017.7963378> and includes functions for data preprocessing ('Epoch'), fragility computation ('calcAdjFrag'), and visualization.

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5.56 score 3 stars 10 scripts 481 downloads

TableContainer - Create a Table with Row, Column, and Table Annotations

Offers a TableContainer() function to create tables enriched with row, column, and table annotations. This package is similar to 'SummarizedExperiment' in Bioconductor <doi:10.18129/B9.bioc.SummarizedExperiment>, but designed to work independently of Bioconductor, it ensures annotations are automatically updated when the table is subset. Additionally, it includes format_tbl() methods for enhanced table formatting and display.

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4.78 score 2 stars 2 dependents 3 scripts 177 downloads

aws.ecx - Communicating with AWS EC2 and ECS using AWS REST APIs

Providing the functions for communicating with Amazon Web Services(AWS) Elastic Compute Cloud(EC2) and Elastic Container Service(ECS). The functions will have the prefix 'ecs_' or 'ec2_' depending on the class of the API. The request will be sent via the REST API and the parameters are given by the function argument. The credentials can be set via 'aws_set_credentials'. The EC2 documentation can be found at <https://docs.aws.amazon.com/AWSEC2/latest/APIReference/Welcome.html> and ECS can be found at <https://docs.aws.amazon.com/AmazonECS/latest/APIReference/Welcome.html>.

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ec2ecsecs-functions

4.18 score 1 stars 2 scripts 276 downloads

ManagedCloudProvider - Providing the Kubernetes-Like Functions for the Non-Kubernetes Cloud Service

Providing the kubernetes-like class 'ManagedCloudProvider' as a child class of the 'CloudProvider' class in the 'DockerParallel' package. The class is able to manage the cloud instance made by the non-kubernetes cloud service. For creating a provider for the non-kubernetes cloud service, the developer needs to define a reference class inherited from 'ManagedCloudProvider' and define the method for the generics runDockerWorkerContainers(), getDockerWorkerStatus() and killDockerWorkerContainers(). For more information, please see the vignette in this package and <https://CRAN.R-project.org/package=DockerParallel>

Last updated

3.70 score 4 scripts 194 downloads

RedisBaseContainer - The Container for the DockerParallel Package

Providing the container for the DockerParallel package.

Last updated

3.70 score 1 scripts 165 downloads